Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR48_32295 | Not Available | Negative | 6925464 - 6926171 | 25497.4 |
| histidine kinase | APR48_32300 | Not Available | Negative | 6926183 - 6927898 | 61581.6 |
| rna methyltransferase | APR48_32305 | Not Available | Positive | 6928078 - 6929325 | 45537.4 |
| hypothetical protein | APR48_32310 | Not Available | Negative | 6929311 - 6929793 | 16998.3 |
| twitching motility protein pilt | APR48_32315 | Not Available | Positive | 6929877 - 6930341 | 16351.9 |
| arac family transcriptional regulator | APR48_32320 | Not Available | Positive | 6930770 - 6931705 | 35154.1 |
| pilus assembly protein | APR48_32325 | Not Available | Positive | 6931883 - 6932188 | 10535.9 |
| hypothetical protein | APR48_32330 | Not Available | Positive | 6932295 - 6934112 | 65315.2 |
| hypothetical protein | APR48_32335 | Not Available | Positive | 6934124 - 6935086 | 34480.8 |
| hypothetical protein | APR48_32340 | Not Available | Positive | 6935092 - 6935805 | 26331.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
