Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | APR48_32195 | Not Available | Positive | 6906072 - 6907043 | 34725.4 |
| hypothetical protein | APR48_32200 | Not Available | Positive | 6907060 - 6907809 | 27341.8 |
| hypothetical protein | APR48_32205 | Not Available | Positive | 6907841 - 6908821 | 34296.4 |
| carnitine dehydratase | APR48_32210 | Not Available | Positive | 6908833 - 6910125 | 46700.5 |
| acetyl-coa acetyltransferase | APR48_32215 | Not Available | Positive | 6910122 - 6911303 | 41169.0 |
| dna-binding protein | APR48_32220 | Not Available | Positive | 6911354 - 6911755 | 15073.0 |
| hypothetical protein | APR48_32225 | Not Available | Positive | 6911712 - 6913496 | 62479.6 |
| carnitine dehydratase | APR48_32230 | Not Available | Positive | 6913493 - 6914602 | 39241.8 |
| hypothetical protein | APR48_32235 | Not Available | Negative | 6914619 - 6915254 | 22427.9 |
| allantoinase | APR48_32240 | Not Available | Negative | 6915251 - 6916156 | 34191.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
