Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_02395 | Not Available | Negative | 518108 - 519001 | 32432.3 |
| mfs transporter | APR48_02400 | Not Available | Negative | 519109 - 520773 | 58830.4 |
| hypothetical protein | APR48_02405 | Not Available | Negative | 520814 - 521569 | 25523.7 |
| hypothetical protein | APR48_02410 | Not Available | Positive | 521825 - 523045 | 42839.2 |
| amidase | APR48_02415 | Not Available | Positive | 523145 - 524623 | 52749.9 |
| phosphohydrolase | APR48_02420 | Not Available | Negative | 524633 - 525304 | 24632.4 |
| hypothetical protein | APR48_02425 | Not Available | Positive | 525577 - 526194 | 21009.2 |
| mfs transporter | APR48_02430 | Not Available | Positive | 526287 - 527963 | 59885.8 |
| lysr family transcriptional regulator | APR48_02435 | Not Available | Positive | 528040 - 528960 | 34079.1 |
| dihydrodipicolinate synthase | APR48_02440 | Not Available | Positive | 529005 - 529904 | 32333.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
