Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 6894149 - 6894222 | Not Available |
| hypothetical protein | APR48_32150 | Not Available | Positive | 6894362 - 6895645 | 47410.0 |
| gntr family transcriptional regulator | APR48_32155 | Not Available | Negative | 6895732 - 6896493 | 27659.1 |
| acyl-coa dehydrogenase | APR48_32160 | Not Available | Positive | 6896660 - 6898909 | 80920.6 |
| hypothetical protein | APR48_32165 | Not Available | Negative | 6898932 - 6899660 | 26853.8 |
| hypothetical protein | APR48_32170 | Not Available | Positive | 6899815 - 6900798 | 33910.4 |
| hypothetical protein | APR48_32175 | Not Available | Positive | 6900844 - 6902019 | 43711.7 |
| arabinose abc transporter permease | APR48_32180 | Not Available | Positive | 6902179 - 6903786 | 57012.7 |
| nitroreductase | APR48_32185 | Not Available | Negative | 6903802 - 6904503 | 25173.6 |
| ring-hydroxylating oxygenase subunit alpha | APR48_32190 | Not Available | Positive | 6904756 - 6906075 | 49898.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
