Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | APR48_32045 | Not Available | Negative | 6872618 - 6873589 | 35519.7 |
| aldehyde dehydrogenase | APR48_32050 | Not Available | Negative | 6873605 - 6875080 | 52868.0 |
| aspartate dehydrogenase | APR48_32055 | Not Available | Negative | 6875089 - 6875886 | 26799.4 |
| hypothetical protein | APR48_32060 | Not Available | Negative | 6875919 - 6877625 | 59559.8 |
| short-chain dehydrogenase | APR48_32065 | Not Available | Negative | 6877618 - 6878451 | 28865.6 |
| iclr family transcriptional regulator | APR48_32070 | Not Available | Negative | 6878457 - 6879293 | 30603.8 |
| hydrolase | APR48_32075 | Not Available | Negative | 6879332 - 6880162 | 28729.7 |
| cupin | APR48_32080 | Not Available | Negative | 6880201 - 6880749 | 20386.3 |
| short-chain dehydrogenase | APR48_32085 | Not Available | Negative | 6880783 - 6881598 | 27788.4 |
| abc transporter substrate-binding protein | APR48_32090 | Not Available | Negative | 6881606 - 6882589 | 33318.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
