Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | APR48_31990 | Not Available | Positive | 6861493 - 6863046 | 55027.6 |
| hypothetical protein | APR48_31995 | Not Available | Positive | 6863342 - 6863983 | 24602.5 |
| abc transporter substrate-binding protein | APR48_32005 | Not Available | Positive | 6864776 - 6865507 | 25466.6 |
| mfs transporter | APR48_32010 | Not Available | Negative | 6865504 - 6866826 | 46232.9 |
| porin | APR48_32015 | Not Available | Negative | 6866855 - 6867961 | 37958.9 |
| ferredoxin | APR48_32020 | Not Available | Negative | 6868007 - 6868975 | 34919.8 |
| 3-phenylpropionate dioxygenase | APR48_32025 | Not Available | Negative | 6868993 - 6870039 | 39629.4 |
| hypothetical protein | APR48_32030 | Not Available | Negative | 6870050 - 6870271 | 8078.56 |
| salicylate hydroxylase | APR48_32035 | Not Available | Negative | 6870301 - 6871461 | 41029.7 |
| laci family transcriptional regulator | APR48_32040 | Not Available | Negative | 6871617 - 6872621 | 34843.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
