Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic abc transporter permease | APR48_31940 | Not Available | Positive | 6849654 - 6850772 | 40164.0 |
| rnd transporter | APR48_31945 | Not Available | Positive | 6850805 - 6852328 | 53888.6 |
| hypothetical protein | APR48_31950 | Not Available | Positive | 6852555 - 6854306 | 61663.7 |
| lysr family transcriptional regulator | APR48_31955 | Not Available | Negative | 6854314 - 6855213 | 32653.1 |
| hypothetical protein | APR48_31960 | Not Available | Positive | 6855307 - 6856431 | 41808.5 |
| mfs transporter | APR48_31965 | Not Available | Positive | 6856488 - 6857441 | 32944.0 |
| multidrug mfs transporter | APR48_31970 | Not Available | Positive | 6857570 - 6858961 | 47511.2 |
| glucokinase | APR48_31975 | Not Available | Negative | 6858962 - 6860005 | 38699.7 |
| hypothetical protein | APR48_31980 | Not Available | Negative | 6860156 - 6861043 | 31686.5 |
| hypothetical protein | APR48_31985 | Not Available | Positive | 6861147 - 6861446 | 9886.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
