Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | APR48_31890 | Not Available | Negative | 6838603 - 6839598 | 35080.9 |
| gntr family transcriptional regulator | APR48_31895 | Not Available | Negative | 6839634 - 6840410 | 27857.6 |
| rieske (2fe-2s) protein | APR48_31900 | Not Available | Negative | 6840407 - 6841513 | 41511.2 |
| methionine synthase | APR48_31905 | Not Available | Positive | 6841670 - 6842791 | 41766.8 |
| glutathione s-transferase | APR48_31910 | Not Available | Positive | 6842819 - 6843484 | 24604.6 |
| phospholipase | APR48_31915 | Not Available | Positive | 6843531 - 6844910 | 50826.3 |
| tetr family transcriptional regulator | APR48_31920 | Not Available | Negative | 6844888 - 6845634 | 26452.2 |
| hypothetical protein | APR48_31925 | Not Available | Positive | 6845728 - 6846744 | 36366.6 |
| abc transporter atp-binding protein | APR48_31930 | Not Available | Positive | 6846741 - 6848513 | 64609.9 |
| hypothetical protein | APR48_31935 | Not Available | Positive | 6848510 - 6849640 | 40718.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
