Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_31840 | Not Available | Negative | 6828206 - 6829435 | 45742.7 |
| lyttr family transcriptional regulator | APR48_31845 | Not Available | Positive | 6829626 - 6830579 | 35542.9 |
| ammonium transporter | APR48_31850 | Not Available | Positive | 6830784 - 6831986 | 42125.8 |
| hypothetical protein | APR48_31855 | Not Available | Negative | 6832003 - 6832344 | 12460.2 |
| hypothetical protein | APR48_31860 | Not Available | Positive | 6832502 - 6833644 | 42058.9 |
| abc transporter atp-binding protein | APR48_31865 | Not Available | Negative | 6833782 - 6834486 | 25177.6 |
| abc transporter atp-binding protein | APR48_31870 | Not Available | Negative | 6834479 - 6835249 | 27688.6 |
| abc transporter permease | APR48_31875 | Not Available | Negative | 6835246 - 6836232 | 34927.9 |
| abc transporter permease | APR48_31880 | Not Available | Negative | 6836232 - 6837104 | 30922.3 |
| abc transporter substrate-binding protein | APR48_31885 | Not Available | Negative | 6837255 - 6838439 | 42074.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
