Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | APR48_31735 | Not Available | Negative | 6809258 - 6809887 | 23501.4 |
| hypothetical protein | APR48_31740 | Not Available | Positive | 6810030 - 6811223 | 44280.6 |
| hypothetical protein | APR48_31750 | Not Available | Positive | 6811854 - 6812840 | 35185.2 |
| tryptophan 2,3-dioxygenase | APR48_31755 | Not Available | Positive | 6812977 - 6813927 | 35850.8 |
| aromatic amino acid aminotransferase | APR48_31760 | Not Available | Positive | 6813961 - 6815124 | 41395.8 |
| monooxygenase | APR48_31765 | Not Available | Positive | 6815121 - 6816281 | 41645.3 |
| abc transporter substrate-binding protein | APR48_31770 | Not Available | Positive | 6816395 - 6817381 | 34381.5 |
| hypothetical protein | APR48_31775 | Not Available | Negative | 6817389 - 6817697 | 10933.6 |
| carboxylesterase | APR48_31780 | Not Available | Positive | 6817892 - 6818557 | 23576.4 |
| antibiotic biosynthesis monooxygenase | APR48_31785 | Not Available | Positive | 6818601 - 6818948 | 12370.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
