Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-dehydroascorbate transporter large permease subunit | APR48_31680 | Not Available | Positive | 6797650 - 6798951 | 45501.2 |
| abc transporter substrate-binding protein | APR48_31685 | Not Available | Positive | 6799016 - 6800020 | 36470.1 |
| dehydratase | APR48_31690 | Not Available | Positive | 6800086 - 6801282 | 43952.6 |
| endonuclease | APR48_31695 | Not Available | Negative | 6801295 - 6802326 | 38389.6 |
| mfs transporter | APR48_31705 | Not Available | Negative | 6802895 - 6804205 | 46268.6 |
| lysr family transcriptional regulator | APR48_31710 | Not Available | Positive | 6804358 - 6805260 | 32820.4 |
| enoyl-coa hydratase | APR48_31715 | Not Available | Negative | 6805261 - 6806040 | 26953.2 |
| coa-transferase | APR48_31720 | Not Available | Negative | 6806037 - 6807254 | 43576.4 |
| laci family transcriptional regulator | APR48_31725 | Not Available | Negative | 6807290 - 6808270 | 34104.2 |
| lysr family transcriptional regulator | APR48_31730 | Not Available | Negative | 6808338 - 6809261 | 33019.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
