Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | APR48_31630 | Not Available | Positive | 6787846 - 6789168 | 46587.0 |
| mate family efflux transporter | APR48_31635 | Not Available | Positive | 6789197 - 6790612 | 49059.6 |
| short-chain dehydrogenase | APR48_31640 | Not Available | Positive | 6790650 - 6791357 | 23999.5 |
| hypothetical protein | APR48_31645 | Not Available | Negative | 6791421 - 6791735 | 12090.0 |
| hypothetical protein | APR48_31650 | Not Available | Negative | 6792017 - 6792754 | 26875.2 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | APR48_31655 | Not Available | Negative | 6792789 - 6793430 | 21975.7 |
| 2-dehydro-3-deoxygalactonokinase | APR48_31660 | Not Available | Negative | 6793427 - 6794338 | 31998.4 |
| dihydroxy-acid dehydratase | APR48_31665 | Not Available | Negative | 6794347 - 6796086 | 63032.1 |
| gntr family transcriptional regulator | APR48_31670 | Not Available | Positive | 6796258 - 6797007 | 27154.9 |
| abc transporter permease | APR48_31675 | Not Available | Positive | 6797093 - 6797653 | 20745.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
