Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_31580 | Not Available | Negative | 6778821 - 6779111 | 11252.6 |
| glyoxalase i | APR48_31585 | Not Available | Negative | 6779828 - 6780277 | 16359.2 |
| glutathione s-transferase | APR48_31590 | Not Available | Negative | 6780340 - 6781035 | 26015.3 |
| abc transporter | APR48_31595 | Not Available | Negative | 6781133 - 6781819 | 24728.0 |
| iron abc transporter permease | APR48_31600 | Not Available | Negative | 6781816 - 6783528 | 59781.6 |
| iron abc transporter substrate-binding protein | APR48_31605 | Not Available | Negative | 6783566 - 6784612 | 37104.6 |
| lysr family transcriptional regulator | APR48_31610 | Not Available | Negative | 6784737 - 6785636 | 31969.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | APR48_31615 | Not Available | Positive | 6785719 - 6786648 | 32459.0 |
| aromatic compound catabolic protein | APR48_31620 | Not Available | Negative | 6786676 - 6787224 | 19334.5 |
| marr family transcriptional regulator | APR48_31625 | Not Available | Positive | 6787281 - 6787736 | 16496.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
