Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_31475 | Not Available | Positive | 6757463 - 6759493 | 73895.4 |
| hypothetical protein | APR48_31480 | Not Available | Negative | 6759547 - 6759891 | 10860.2 |
| arginine--trna ligase | APR48_31485 | Not Available | Positive | 6760023 - 6761708 | 61420.8 |
| sporulation protein | APR48_31490 | Not Available | Positive | 6761720 - 6762484 | 25948.8 |
| disulfide bond formation protein dsba | APR48_31495 | Not Available | Positive | 6762673 - 6763320 | 23241.8 |
| organic solvent tolerance protein osta | APR48_31500 | Not Available | Positive | 6763520 - 6764233 | 24864.2 |
| abc transporter atp-binding protein | APR48_31505 | Not Available | Positive | 6764230 - 6765024 | 29025.2 |
| rna polymerase sigma-54 factor | APR48_31510 | Not Available | Positive | 6765055 - 6766644 | 58545.9 |
| phospholipase | APR48_31515 | Not Available | Positive | 6766655 - 6768253 | 58978.8 |
| threonine transporter | APR48_31520 | Not Available | Negative | 6768263 - 6768907 | 21766.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
