Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | APR48_31425 | Not Available | Negative | 6746055 - 6747275 | 42834.4 |
| malate synthase g | APR48_31430 | Not Available | Negative | 6747370 - 6749544 | 77928.3 |
| aspartate aminotransferase | APR48_31435 | Not Available | Positive | 6749843 - 6750832 | 34451.1 |
| abc transporter substrate-binding protein | APR48_31440 | Not Available | Positive | 6750906 - 6751874 | 33572.5 |
| iclr family transcriptional regulator | APR48_31445 | Not Available | Negative | 6751991 - 6752731 | 26573.7 |
| 3-hydroxy-3-methylglutaryl-coa lyase | APR48_31450 | Not Available | Positive | 6752826 - 6753761 | 32458.3 |
| coa-transferase | APR48_31455 | Not Available | Positive | 6753754 - 6754944 | 43049.1 |
| laci family transcriptional regulator | APR48_31460 | Not Available | Positive | 6754949 - 6755941 | 34219.6 |
| lysr family transcriptional regulator | APR48_31465 | Not Available | Positive | 6756006 - 6756932 | 33667.3 |
| hypothetical protein | APR48_31470 | Not Available | Positive | 6757003 - 6757458 | 16643.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
