Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit gamma/tau | APR48_31375 | Not Available | Positive | 6738428 - 6739730 | 47639.9 |
| hypothetical protein | APR48_31380 | Not Available | Negative | 6739718 - 6739939 | 7802.36 |
| 6-phosphofructokinase | APR48_31385 | Not Available | Negative | 6739939 - 6741201 | 45333.0 |
| steroid delta-isomerase | APR48_31390 | Not Available | Negative | 6741274 - 6741621 | 13133.7 |
| enoyl-coa hydratase | APR48_31395 | Not Available | Negative | 6741671 - 6742498 | 29798.0 |
| hypothetical protein | APR48_31400 | Not Available | Negative | 6742652 - 6742969 | 11382.7 |
| lysr family transcriptional regulator | APR48_31405 | Not Available | Positive | 6743051 - 6744007 | 34768.0 |
| fasciclin | APR48_31410 | Not Available | Negative | 6744029 - 6744601 | 18924.4 |
| hypothetical protein | APR48_31415 | Not Available | Positive | 6745045 - 6745260 | 7955.51 |
| hypothetical protein | APR48_31420 | Not Available | Positive | 6745263 - 6746039 | 30408.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
