Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR48_31175 | Not Available | Positive | 6693234 - 6694232 | 34918.3 |
| amp-dependent synthetase | APR48_31180 | Not Available | Positive | 6694283 - 6696244 | 68796.2 |
| abc transporter substrate-binding protein | APR48_31185 | Not Available | Positive | 6696321 - 6697337 | 35949.8 |
| electron transporter rnfb | APR48_31190 | Not Available | Positive | 6697371 - 6698120 | 26886.0 |
| electron transfer flavoprotein subunit beta | APR48_31195 | Not Available | Positive | 6698135 - 6699067 | 31289.1 |
| nitronate monooxygenase | APR48_31200 | Not Available | Positive | 6699082 - 6700053 | 34681.0 |
| hypothetical protein | APR48_31205 | Not Available | Positive | 6700433 - 6700702 | 9635.39 |
| hypothetical protein | APR48_31210 | Not Available | Positive | 6700993 - 6701553 | 20390.2 |
| hypothetical protein | APR48_31215 | Not Available | Negative | 6704843 - 6705178 | 12775.3 |
| hypothetical protein | APR48_31220 | Not Available | Negative | 6705268 - 6705645 | 13650.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
