Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | APR48_02295 | Not Available | Negative | 495602 - 496480 | 30972.3 |
| lysr family transcriptional regulator | APR48_02300 | Not Available | Positive | 496589 - 497491 | 32488.3 |
| asnc family transcriptional regulator | APR48_02305 | Not Available | Negative | 497501 - 497959 | 16627.3 |
| tryptophanase | APR48_02310 | Not Available | Positive | 498233 - 499624 | 51043.9 |
| methionine aminopeptidase | APR48_02315 | Not Available | Negative | 499621 - 500415 | 28890.8 |
| hypothetical protein | APR48_02320 | Not Available | Negative | 500412 - 500690 | 9918.17 |
| succinate-semialdehyde dehydrogenase | APR48_02325 | Not Available | Negative | 500767 - 502233 | 51805.4 |
| 4-aminobutyrate aminotransferase | APR48_02330 | Not Available | Negative | 502230 - 503498 | 44297.7 |
| dna-binding protein | APR48_02335 | Not Available | Positive | 503616 - 505091 | 53819.6 |
| extensin | APR48_02340 | Not Available | Positive | 505211 - 505954 | 26729.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
