Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation transporter | APR48_31065 | Not Available | Positive | 6669297 - 6672458 | 115544.0 |
| hypothetical protein | APR48_31070 | Not Available | Positive | 6672664 - 6672987 | 11486.1 |
| transposase | APR48_31075 | Not Available | Positive | 6672984 - 6673322 | 12293.0 |
| dna polymerase | APR48_31090 | Not Available | Negative | 6673950 - 6675392 | 53541.3 |
| biotin synthase | APR48_31095 | Not Available | Negative | 6675404 - 6676657 | 46106.6 |
| hypothetical protein | APR48_31100 | Not Available | Negative | 6676771 - 6677454 | 23828.9 |
| 4-oxalomesaconate hydratase | APR48_31105 | Not Available | Negative | 6677447 - 6678517 | 39206.6 |
| laci family transcriptional regulator | APR48_31110 | Not Available | Negative | 6678534 - 6679517 | 33664.9 |
| hypothetical protein | APR48_31115 | Not Available | Positive | 6679627 - 6680400 | 26582.9 |
| hypothetical protein | APR48_31120 | Not Available | Negative | 6680401 - 6681429 | 35691.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
