Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_31015 | Not Available | Negative | 6654210 - 6654641 | 15372.6 |
| two-component system response regulator | APR48_31020 | Not Available | Positive | 6655287 - 6655970 | 25480.9 |
| histidine kinase | APR48_31025 | Not Available | Positive | 6656072 - 6657373 | 47540.0 |
| type ii restriction endonuclease | APR48_31030 | Not Available | Positive | 6657558 - 6658820 | 46180.2 |
| copper resistance protein copb | APR48_31035 | Not Available | Negative | 6660786 - 6661586 | 29660.1 |
| copper resistance protein copa | APR48_31040 | Not Available | Negative | 6662096 - 6663895 | 67107.6 |
| hypothetical protein | APR48_31045 | Not Available | Positive | 6664897 - 6665346 | 15394.1 |
| hypothetical protein | APR48_31050 | Not Available | Positive | 6665629 - 6666081 | 15493.7 |
| transporter | APR48_31055 | Not Available | Positive | 6666218 - 6667582 | 49926.6 |
| secretion protein hlyd | APR48_31060 | Not Available | Positive | 6667579 - 6669300 | 59938.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
