Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldolase | APR48_30910 | Not Available | Positive | 6630639 - 6631355 | 26071.4 |
| transporter | APR48_30915 | Not Available | Positive | 6631352 - 6632662 | 45632.9 |
| hypothetical protein | APR48_30920 | Not Available | Negative | 6632704 - 6634428 | 62402.6 |
| hypothetical protein | APR48_30925 | Not Available | Negative | 6634443 - 6635093 | 23979.7 |
| acetyl esterase | APR48_30930 | Not Available | Negative | 6635102 - 6636013 | 33277.9 |
| peptide abc transporter atp-binding protein | APR48_30935 | Not Available | Negative | 6636085 - 6637752 | 60861.4 |
| peptide abc transporter permease | APR48_30940 | Not Available | Negative | 6637749 - 6638561 | 28763.0 |
| peptide abc transporter | APR48_30945 | Not Available | Negative | 6638561 - 6639505 | 34356.5 |
| peptide abc transporter substrate-binding protein | APR48_30950 | Not Available | Negative | 6639522 - 6641072 | 56034.0 |
| hypothetical protein | APR48_30960 | Not Available | Positive | 6641627 - 6642127 | 18572.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
