Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine abc transporter atp-binding protein | APR48_30705 | Not Available | Negative | 6587838 - 6588590 | 27745.8 |
| abc transporter substrate-binding protein | APR48_30710 | Not Available | Negative | 6588759 - 6589556 | 28108.0 |
| amino acid abc transporter permease | APR48_30715 | Not Available | Negative | 6589631 - 6590284 | 23529.3 |
| abc transporter permease | APR48_30720 | Not Available | Negative | 6590312 - 6590983 | 24843.9 |
| hypothetical protein | APR48_30725 | Not Available | Positive | 6591161 - 6592873 | 64842.4 |
| isochorismatase | APR48_30730 | Not Available | Negative | 6593021 - 6593557 | 19358.8 |
| mbl fold metallo-hydrolase | APR48_30735 | Not Available | Positive | 6593710 - 6594825 | 41678.5 |
| hypothetical protein | APR48_30740 | Not Available | Negative | 6594833 - 6595021 | 6965.53 |
| dna topoisomerase iv | APR48_30745 | Not Available | Negative | 6595021 - 6597420 | 86189.2 |
| galactose oxidase | APR48_30750 | Not Available | Negative | 6597468 - 6598586 | 39698.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
