Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_30655 | Not Available | Positive | 6579137 - 6579595 | 15800.2 |
| cytochrome c | APR48_30660 | Not Available | Positive | 6579649 - 6579936 | 10439.6 |
| (2fe-2s)-binding protein | APR48_30665 | Not Available | Positive | 6579951 - 6580280 | 11723.1 |
| hypothetical protein | APR48_30670 | Not Available | Negative | 6580310 - 6580507 | 7270.25 |
| hypothetical protein | APR48_30675 | Not Available | Negative | 6580643 - 6582214 | 56767.9 |
| glucose-methanol-choline oxidoreductase | APR48_30680 | Not Available | Positive | 6582453 - 6584198 | 61990.0 |
| dehydrogenase | APR48_30685 | Not Available | Negative | 6584089 - 6585123 | 36404.6 |
| d-glycerate dehydrogenase | APR48_30690 | Not Available | Negative | 6585120 - 6586118 | 35403.6 |
| 2-dehydro-3-deoxygluconokinase | APR48_30695 | Not Available | Negative | 6586124 - 6587077 | 33827.2 |
| glutamine abc transporter atp-binding protein | APR48_30700 | Not Available | Negative | 6587095 - 6587838 | 26649.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
