Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_30600 | Not Available | Positive | 6568212 - 6568520 | 9847.51 |
| hypothetical protein | APR48_30605 | Not Available | Positive | 6568525 - 6568905 | 13791.4 |
| hypothetical protein | APR48_30610 | Not Available | Negative | 6568915 - 6569838 | 33942.7 |
| lysr family transcriptional regulator | APR48_30615 | Not Available | Negative | 6569857 - 6570777 | 33285.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | APR48_30620 | Not Available | Positive | 6570846 - 6571883 | 36098.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | APR48_30625 | Not Available | Positive | 6571880 - 6572551 | 23237.2 |
| flagellar biosynthesis sigma factor | APR48_30630 | Not Available | Negative | 6572584 - 6573306 | 26883.4 |
| flagellar biosynthesis protein flhf | APR48_30635 | Not Available | Negative | 6573359 - 6574522 | 40851.5 |
| a circularly permuted atpgrasp family protein | APR48_30640 | Not Available | Positive | 6574523 - 6577188 | 95991.5 |
| abc transporter substrate-binding protein | APR48_30645 | Not Available | Positive | 6577257 - 6578069 | 28380.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
