Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_30400 | Not Available | Negative | 6527880 - 6528725 | 30019.8 |
| abc transporter substrate-binding protein | APR48_30405 | Not Available | Negative | 6528748 - 6529728 | 34263.8 |
| hypothetical protein | APR48_30410 | Not Available | Positive | 6529832 - 6530905 | 39169.6 |
| hypothetical protein | APR48_30415 | Not Available | Negative | 6530955 - 6532220 | 43516.8 |
| fad-dependent oxidoreductase | APR48_30420 | Not Available | Positive | 6532678 - 6534480 | 66493.8 |
| crp/fnr family transcriptional regulator | APR48_30425 | Not Available | Negative | 6534493 - 6535203 | 25952.2 |
| hypothetical protein | APR48_30430 | Not Available | Negative | 6535217 - 6535597 | 13991.7 |
| 3-keto-5-aminohexanoate cleavage protein | APR48_30435 | Not Available | Positive | 6535754 - 6536674 | 33366.2 |
| abc transporter permease | APR48_30440 | Not Available | Positive | 6536713 - 6537918 | 42911.1 |
| 3-hydroxyacyl-coa dehydrogenase | APR48_30445 | Not Available | Positive | 6537915 - 6538862 | 33429.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
