Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate permease | APR48_30245 | Not Available | Positive | 6494725 - 6496065 | 48174.4 |
| hypothetical protein | APR48_30250 | Not Available | Positive | 6496235 - 6496717 | 18315.7 |
| hypothetical protein | APR48_30255 | Not Available | Positive | 6496714 - 6496944 | 8441.51 |
| hypothetical protein | APR48_30260 | Not Available | Negative | 6497143 - 6498135 | 34675.9 |
| hypothetical protein | APR48_30265 | Not Available | Negative | 6498176 - 6499546 | 49261.5 |
| feruloyl esterase | APR48_30270 | Not Available | Negative | 6499549 - 6502242 | 92077.2 |
| lysr family transcriptional regulator | APR48_30275 | Not Available | Positive | 6502419 - 6503351 | 33371.8 |
| abc transporter substrate-binding protein | APR48_30280 | Not Available | Positive | 6503348 - 6504343 | 35192.5 |
| hypothetical protein | APR48_30285 | Not Available | Negative | 6504371 - 6504931 | 20851.3 |
| hypothetical protein | APR48_30290 | Not Available | Negative | 6505001 - 6505279 | 10387.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
