Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR48_30190 | Not Available | Positive | 6483026 - 6484600 | 57658.7 |
| two-component system response regulator | APR48_30195 | Not Available | Positive | 6484608 - 6485318 | 26027.2 |
| hypothetical protein | APR48_30200 | Not Available | Negative | 6485328 - 6486110 | 27897.8 |
| aldehyde dehydrogenase | APR48_30205 | Not Available | Positive | 6486208 - 6487605 | 50977.6 |
| cyanate hydratase | APR48_30215 | Not Available | Negative | 6488664 - 6489107 | 16555.0 |
| histidine kinase | APR48_30220 | Not Available | Negative | 6489288 - 6489719 | 17318.2 |
| tetr family transcriptional regulator | APR48_30225 | Not Available | Positive | 6489846 - 6490454 | 21935.4 |
| lactate permease | APR48_30230 | Not Available | Negative | 6490432 - 6492093 | 58619.3 |
| lysr family transcriptional regulator | APR48_30235 | Not Available | Positive | 6492351 - 6493235 | 32436.1 |
| lactate dehydrogenase | APR48_30240 | Not Available | Positive | 6493416 - 6494573 | 41986.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
