Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | APR48_30140 | Not Available | Positive | 6472294 - 6473604 | 44366.5 |
| hypothetical protein | APR48_30145 | Not Available | Positive | 6473787 - 6474182 | 15586.6 |
| diguanylate cyclase | APR48_30150 | Not Available | Positive | 6474312 - 6476306 | 71658.0 |
| hypothetical protein | APR48_30155 | Not Available | Negative | 6476310 - 6476831 | 17597.4 |
| hypothetical protein | APR48_30160 | Not Available | Negative | 6476845 - 6477159 | 10781.3 |
| porin | APR48_30165 | Not Available | Negative | 6477234 - 6478391 | 40056.5 |
| hypothetical protein | APR48_30170 | Not Available | Positive | 6478569 - 6479240 | 24974.5 |
| outer membrane protein assembly factor bama | APR48_30175 | Not Available | Positive | 6479306 - 6481705 | 87983.4 |
| two-component system response regulator | APR48_30180 | Not Available | Positive | 6481711 - 6482394 | 24701.8 |
| hypothetical protein | APR48_30185 | Not Available | Negative | 6482398 - 6482709 | 10856.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
