Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_02190 | Not Available | Negative | 477118 - 477453 | 12455.3 |
| cupin | APR48_02195 | Not Available | Negative | 477535 - 478023 | 16768.2 |
| dtdp-glucose 4,6-dehydratase | APR48_02200 | Not Available | Negative | 478068 - 478811 | 25782.9 |
| hypothetical protein | APR48_02205 | Not Available | Negative | 478932 - 480335 | 49138.8 |
| flavin reductase domain-containing protein | APR48_02210 | Not Available | Positive | 480465 - 481091 | 22903.5 |
| hypothetical protein | APR48_02215 | Not Available | Positive | 481191 - 482282 | 38629.1 |
| glyoxalase | APR48_02220 | Not Available | Negative | 482293 - 482700 | 14791.5 |
| arac family transcriptional regulator | APR48_02225 | Not Available | Negative | 482697 - 483209 | 18603.0 |
| oxidoreductase | APR48_02230 | Not Available | Negative | 483206 - 483952 | 25320.4 |
| hypothetical protein | APR48_02235 | Not Available | Negative | 484038 - 484712 | 23347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
