Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase | APR48_30040 | Not Available | Negative | 6456087 - 6457151 | 36053.6 |
| hypothetical protein | APR48_30045 | Not Available | Negative | 6457148 - 6457921 | 27775.1 |
| mfs transporter permease | APR48_30050 | Not Available | Negative | 6457918 - 6459270 | 48120.6 |
| 2-alkenal reductase | APR48_30055 | Not Available | Positive | 6459579 - 6460742 | 40413.4 |
| twin-arginine protein translocation system subunit tatc | APR48_30060 | Not Available | Negative | 6460837 - 6461646 | 29475.9 |
| preprotein translocase | APR48_30065 | Not Available | Negative | 6461728 - 6462189 | 17015.7 |
| preprotein translocase subunit tata | APR48_30070 | Not Available | Negative | 6462202 - 6462447 | 8491.25 |
| hit family hydrolase | APR48_30075 | Not Available | Negative | 6462510 - 6462869 | 13160.0 |
| hypothetical protein | APR48_30080 | Not Available | Negative | 6462859 - 6463248 | 14689.2 |
| phosphoribosyl-atp pyrophosphatase | APR48_30085 | Not Available | Negative | 6463296 - 6463676 | 13573.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
