Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharides biosynthesis glycosyltransferase | APR48_29990 | Not Available | Negative | 6439094 - 6440338 | 46610.1 |
| udp-n-acetylglucosamine 2-epimerase | APR48_29995 | Not Available | Negative | 6440338 - 6441405 | 38762.9 |
| glycosyl transferase | APR48_30000 | Not Available | Negative | 6443149 - 6444288 | 42524.4 |
| exsb family protein | APR48_30005 | Not Available | Negative | 6445615 - 6446763 | 44809.6 |
| glycosyl amidation-associated protein wbuz | APR48_30010 | Not Available | Negative | 6446772 - 6447542 | 27415.5 |
| imidazole glycerol phosphate synthase subunit hish | APR48_30015 | Not Available | Negative | 6447543 - 6448160 | 22680.6 |
| serine acetyltransferase | APR48_30020 | Not Available | Negative | 6450622 - 6451212 | 21044.2 |
| oxidoreductase | APR48_30025 | Not Available | Negative | 6451230 - 6452177 | 35630.5 |
| vi polysaccharide biosynthesis protein vipa/tvib | APR48_30030 | Not Available | Negative | 6452207 - 6453508 | 47398.9 |
| large-conductance mechanosensitive channel | APR48_30035 | Not Available | Positive | 6455618 - 6456049 | 15341.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
