Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_29890 | Not Available | Positive | 6417990 - 6418997 | 35215.8 |
| hypothetical protein | APR48_29895 | Not Available | Positive | 6419322 - 6420287 | 35158.9 |
| hypothetical protein | APR48_29900 | Not Available | Positive | 6420396 - 6421364 | 33970.0 |
| group ii intron reverse transcriptase/maturase | APR48_29905 | Not Available | Positive | 6421792 - 6423168 | 51622.5 |
| peptidase s15 | APR48_29910 | Not Available | Positive | 6423383 - 6425140 | 64591.2 |
| 3-keto-5-aminohexanoate cleavage protein | APR48_29915 | Not Available | Positive | 6425166 - 6426095 | 33688.7 |
| sugar dehydrogenase | APR48_29920 | Not Available | Positive | 6426106 - 6426852 | 25768.8 |
| hypothetical protein | APR48_29925 | Not Available | Positive | 6426854 - 6427207 | 13401.2 |
| hypothetical protein | APR48_29930 | Not Available | Positive | 6427210 - 6427923 | 26633.8 |
| acyl-coa synthetase | APR48_29935 | Not Available | Positive | 6428015 - 6429652 | 60219.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
