Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR48_29840 | Not Available | Negative | 6407697 - 6408380 | 25406.6 |
| cyclase | APR48_29845 | Not Available | Negative | 6408387 - 6409457 | 39171.9 |
| hypothetical protein | APR48_29850 | Not Available | Positive | 6409665 - 6410540 | 31871.5 |
| lysr family transcriptional regulator | APR48_29855 | Not Available | Positive | 6410946 - 6411851 | 32851.6 |
| 3-keto-5-aminohexanoate cleavage protein | APR48_29860 | Not Available | Positive | 6412158 - 6413093 | 33717.6 |
| hypothetical protein | APR48_29865 | Not Available | Positive | 6413107 - 6413571 | 16317.8 |
| hypothetical protein | APR48_29870 | Not Available | Positive | 6413568 - 6415718 | 76284.8 |
| hypothetical protein | APR48_29875 | Not Available | Positive | 6415736 - 6416704 | 33996.2 |
| hypothetical protein | APR48_29880 | Not Available | Positive | 6416719 - 6417078 | 13757.7 |
| hypothetical protein | APR48_29885 | Not Available | Positive | 6417128 - 6417949 | 29110.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
