Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| a/g-specific adenine glycosylase | APR48_29685 | Not Available | Positive | 6377540 - 6378580 | 38561.3 |
| nucleotide-binding protein | APR48_29690 | Not Available | Negative | 6378606 - 6379481 | 32639.1 |
| dna repair protein recn | APR48_29695 | Not Available | Negative | 6379513 - 6381198 | 59994.9 |
| nad kinase | APR48_29700 | Not Available | Negative | 6381200 - 6382108 | 32533.1 |
| hrca family transcriptional regulator | APR48_29705 | Not Available | Positive | 6382139 - 6383146 | 36784.3 |
| Trna-met | Not Available | Not Available | Positive | 6383186 - 6383262 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 6383333 - 6383409 | Not Available |
| transcription elongation factor greb | APR48_29720 | Not Available | Positive | 6383518 - 6384093 | 20915.5 |
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | APR48_29725 | Not Available | Negative | 6384116 - 6386371 | 83053.6 |
| dna-directed rna polymerase subunit omega | APR48_29730 | Not Available | Negative | 6386467 - 6386670 | 7431.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
