Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_29635 | Not Available | Negative | 6367828 - 6368307 | 17176.0 |
| peptidyl-trna hydrolase | APR48_29640 | Not Available | Negative | 6368404 - 6369036 | 22941.7 |
| 50s ribosomal protein l25 | APR48_29645 | Not Available | Negative | 6369120 - 6369761 | 23281.2 |
| ribose-phosphate pyrophosphokinase | APR48_29650 | Not Available | Negative | 6369897 - 6370871 | 35083.3 |
| Trna-gln | Not Available | Not Available | Positive | 6371046 - 6371122 | Not Available |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | APR48_29660 | Not Available | Negative | 6371195 - 6372085 | 32026.5 |
| hypothetical protein | APR48_29665 | Not Available | Negative | 6372082 - 6372606 | 18412.9 |
| hypothetical protein | APR48_29670 | Not Available | Negative | 6372609 - 6374507 | 68963.2 |
| formamidopyrimidine-dna glycosylase | APR48_29675 | Not Available | Positive | 6374579 - 6375388 | 29513.1 |
| dynamin family protein | APR48_29680 | Not Available | Positive | 6375499 - 6377466 | 73163.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
