Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | APR48_02140 | Not Available | Positive | 465025 - 466161 | 41265.0 |
| hypothetical protein | APR48_02145 | Not Available | Positive | 466158 - 467198 | 37002.3 |
| hypothetical protein | APR48_02150 | Not Available | Positive | 467234 - 468238 | 35090.9 |
| acetyl-coa acetyltransferase | APR48_02155 | Not Available | Positive | 468235 - 469437 | 42931.0 |
| histidine kinase | APR48_02160 | Not Available | Positive | 469733 - 470947 | 43365.9 |
| luxr family transcriptional regulator | APR48_02165 | Not Available | Negative | 471052 - 472146 | 39802.4 |
| hypothetical protein | APR48_02170 | Not Available | Negative | 472350 - 474257 | 66306.7 |
| luxr family transcriptional regulator | APR48_02175 | Not Available | Negative | 474581 - 476056 | 52155.1 |
| hypothetical protein | APR48_02180 | Not Available | Positive | 476193 - 476738 | 19567.2 |
| hypothetical protein | APR48_02185 | Not Available | Negative | 476795 - 477121 | 11639.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
