Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR48_29585 | Not Available | Positive | 6357960 - 6358946 | 34055.2 |
| carnitine dehydratase | APR48_29590 | Not Available | Positive | 6359005 - 6360141 | 40051.9 |
| glycosyl transferase | APR48_29595 | Not Available | Positive | 6360179 - 6361237 | 38406.0 |
| hypothetical protein | APR48_29600 | Not Available | Positive | 6361249 - 6362235 | 35460.1 |
| hypothetical protein | APR48_29605 | Not Available | Positive | 6362225 - 6362983 | 27847.6 |
| hypothetical protein | APR48_29610 | Not Available | Positive | 6362998 - 6364125 | 40432.3 |
| hypothetical protein | APR48_29615 | Not Available | Negative | 6364122 - 6365807 | 60192.4 |
| abc transporter substrate-binding protein | APR48_29620 | Not Available | Negative | 6365995 - 6366987 | 34901.3 |
| hypothetical protein | APR48_29625 | Not Available | Negative | 6367046 - 6367264 | 6765.12 |
| ferredoxin | APR48_29630 | Not Available | Positive | 6367549 - 6367842 | 10589.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
