Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_29430 | Not Available | Negative | 6329097 - 6329744 | 22012.0 |
| hypothetical protein | APR48_29435 | Not Available | Negative | 6329758 - 6330342 | 20908.2 |
| arac family transcriptional regulator | APR48_29440 | Not Available | Positive | 6330463 - 6331257 | 28816.1 |
| lysr family transcriptional regulator | APR48_29445 | Not Available | Negative | 6331324 - 6332220 | 32679.3 |
| lysr family transcriptional regulator | APR48_29455 | Not Available | Positive | 6332686 - 6333588 | 33684.8 |
| carboxymethylenebutenolidase | APR48_29460 | Not Available | Negative | 6333634 - 6334317 | 24013.5 |
| 2-hydroxychromene-2-carboxylate isomerase | APR48_29465 | Not Available | Negative | 6334398 - 6335009 | 22161.6 |
| sugar dehydrogenase | APR48_29470 | Not Available | Positive | 6335149 - 6335898 | 25919.2 |
| hypothetical protein | APR48_29475 | Not Available | Positive | 6335910 - 6336545 | 22251.1 |
| hypothetical protein | APR48_29480 | Not Available | Negative | 6336567 - 6337028 | 17103.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
