Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hyld | APR48_29325 | Not Available | Negative | 6301816 - 6302958 | 39574.5 |
| phob family transcriptional regulator | APR48_29330 | Not Available | Positive | 6303105 - 6303788 | 25325.7 |
| histidine kinase | APR48_29335 | Not Available | Positive | 6303781 - 6305223 | 51099.0 |
| glycosyl transferase family 2 | APR48_29340 | Not Available | Positive | 6305336 - 6306328 | 36712.6 |
| hypothetical protein | APR48_29345 | Not Available | Positive | 6306325 - 6307158 | 29864.4 |
| hypothetical protein | APR48_29350 | Not Available | Positive | 6307336 - 6308871 | 55829.7 |
| hypothetical protein | APR48_29355 | Not Available | Positive | 6308885 - 6309865 | 35285.6 |
| hypothetical protein | APR48_29360 | Not Available | Positive | 6309936 - 6310979 | 39254.7 |
| hypothetical protein | APR48_29365 | Not Available | Negative | 6310981 - 6312093 | 39438.1 |
| hypothetical protein | APR48_29370 | Not Available | Positive | 6312247 - 6313242 | 34938.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
