Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_29275 | Not Available | Positive | 6291536 - 6291937 | 14878.8 |
| acyl-coa dehydrogenase | APR48_29280 | Not Available | Positive | 6291952 - 6293187 | 44749.1 |
| taurine dioxygenase | APR48_29285 | Not Available | Positive | 6293222 - 6294064 | 31385.6 |
| hypothetical protein | APR48_29290 | Not Available | Negative | 6294087 - 6294875 | 28365.8 |
| hypothetical protein | APR48_29295 | Not Available | Negative | 6294890 - 6295312 | 14896.1 |
| acyl-coa dehydrogenase | APR48_29300 | Not Available | Negative | 6295313 - 6296509 | 43138.9 |
| hypothetical protein | APR48_29305 | Not Available | Negative | 6296545 - 6296851 | 10703.8 |
| translation initiation inhibitor, yjgf family protein | APR48_29310 | Not Available | Negative | 6296851 - 6297222 | 13401.0 |
| histidine kinase | APR48_29315 | Not Available | Negative | 6297219 - 6298715 | 51820.4 |
| hypothetical protein | APR48_29320 | Not Available | Negative | 6298728 - 6301823 | 111441.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
