Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | APR48_29225 | Not Available | Negative | 6279531 - 6280436 | 32191.5 |
| acyl-coa dehydrogenase | APR48_29230 | Not Available | Negative | 6280503 - 6281654 | 42177.4 |
| acyl-coa dehydrogenase | APR48_29235 | Not Available | Negative | 6281666 - 6282874 | 42189.3 |
| acyl-coa dehydrogenase | APR48_29240 | Not Available | Negative | 6282893 - 6284059 | 42878.8 |
| 2,4-dienoyl-coa reductase | APR48_29245 | Not Available | Negative | 6284078 - 6286162 | 73871.6 |
| transglutaminase | APR48_29250 | Not Available | Positive | 6286334 - 6287026 | 25292.0 |
| alpha/beta hydrolase | APR48_29255 | Not Available | Positive | 6287085 - 6287933 | 29706.2 |
| amp-dependent synthetase | APR48_29260 | Not Available | Positive | 6287930 - 6289435 | 52191.3 |
| hypothetical protein | APR48_29265 | Not Available | Negative | 6289469 - 6290290 | 28061.6 |
| thiolase | APR48_29270 | Not Available | Positive | 6290347 - 6291519 | 40578.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
