Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | APR48_29175 | Not Available | Negative | 6267808 - 6268602 | 27858.5 |
| hypothetical protein | APR48_29180 | Not Available | Negative | 6268719 - 6269690 | 34165.4 |
| monooxygenase | APR48_29185 | Not Available | Positive | 6269856 - 6271775 | 71109.2 |
| hypothetical protein | APR48_29190 | Not Available | Negative | 6271765 - 6272949 | 39695.7 |
| acyl-coa dehydrogenase | APR48_29195 | Not Available | Negative | 6272946 - 6274109 | 42099.0 |
| 2-methylcitrate dehydratase | APR48_29200 | Not Available | Negative | 6274106 - 6275509 | 49117.8 |
| enoyl-coa hydratase | APR48_29205 | Not Available | Positive | 6275632 - 6276420 | 28076.8 |
| hypothetical protein | APR48_29210 | Not Available | Negative | 6276497 - 6277474 | 33740.9 |
| hypothetical protein | APR48_29215 | Not Available | Negative | 6277497 - 6278663 | 42444.5 |
| enoyl-coa hydratase | APR48_29220 | Not Available | Negative | 6278683 - 6279486 | 28740.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
