Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine amidotransferase | APR48_29125 | Not Available | Negative | 6256522 - 6257256 | 26096.9 |
| alkaline phosphatase | APR48_29130 | Not Available | Negative | 6257277 - 6258053 | 27627.6 |
| phospholipase c, phosphocholine-specific | APR48_29135 | Not Available | Negative | 6258126 - 6260240 | 76108.0 |
| hypothetical protein | APR48_29140 | Not Available | Negative | 6260367 - 6261569 | 42785.0 |
| branched-chain amino acid abc transporter permease | APR48_29145 | Not Available | Negative | 6261622 - 6262659 | 36352.5 |
| abc transporter permease | APR48_29150 | Not Available | Negative | 6262659 - 6263531 | 30582.1 |
| amp-dependent synthetase | APR48_29155 | Not Available | Negative | 6263531 - 6265411 | 70265.9 |
| abc transporter atp-binding protein | APR48_29160 | Not Available | Negative | 6265408 - 6266187 | 28556.7 |
| abc transporter atp-binding protein | APR48_29165 | Not Available | Negative | 6266195 - 6266986 | 28900.2 |
| 2-ketocyclohexanecarboxyl-coa hydrolase | APR48_29170 | Not Available | Negative | 6267008 - 6267793 | 28331.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
