Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | APR48_29070 | Not Available | Positive | 6244472 - 6244813 | 11320.3 |
| beta-ala-xaa dipeptidase | APR48_29075 | Not Available | Positive | 6244967 - 6246712 | 61673.2 |
| merr family transcriptional regulator | APR48_29085 | Not Available | Negative | 6247236 - 6247550 | 11403.7 |
| cytochrome c biogenesis protein | APR48_29090 | Not Available | Negative | 6247552 - 6248514 | 34978.2 |
| phosphoglycerate mutase | APR48_29095 | Not Available | Negative | 6248565 - 6249218 | 22540.8 |
| aculeacin a acylase | APR48_29100 | Not Available | Negative | 6249275 - 6251662 | 84406.6 |
| glutathione s-transferase | APR48_29105 | Not Available | Negative | 6251776 - 6252357 | 21719.3 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | APR48_29110 | Not Available | Negative | 6252387 - 6253019 | 22387.3 |
| transcriptional regulator | APR48_29115 | Not Available | Negative | 6253113 - 6254099 | 35574.4 |
| porin | APR48_29120 | Not Available | Positive | 6254188 - 6256380 | 79575.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
