Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional riboflavin kinase/fmn adenylyltransferase | APR48_28920 | Not Available | Positive | 6209368 - 6210480 | 39874.8 |
| isoleucine--trna ligase | APR48_28925 | Not Available | Positive | 6210603 - 6213455 | 106047.0 |
| signal peptidase ii | APR48_28930 | Not Available | Positive | 6213455 - 6213967 | 18794.9 |
| laci family transcriptional regulator | APR48_28935 | Not Available | Positive | 6214120 - 6215139 | 35760.2 |
| abc transporter substrate-binding protein | APR48_28940 | Not Available | Positive | 6215191 - 6216204 | 36302.6 |
| abc transporter permease | APR48_28945 | Not Available | Positive | 6216241 - 6217071 | 29457.5 |
| abc transporter permease | APR48_28950 | Not Available | Positive | 6217079 - 6217879 | 28973.2 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | APR48_28955 | Not Available | Positive | 6217869 - 6218942 | 38849.1 |
| metallophosphatase | APR48_28960 | Not Available | Positive | 6218939 - 6219799 | 30971.9 |
| hypothetical protein | APR48_28965 | Not Available | Positive | 6219893 - 6221554 | 59717.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
