Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR48_28820 | Not Available | Negative | 6188387 - 6189595 | 42683.3 |
| abc transporter permease | APR48_28825 | Not Available | Negative | 6189609 - 6190538 | 32306.1 |
| recombination factor protein rara | APR48_28830 | Not Available | Negative | 6190780 - 6192072 | 47436.8 |
| outer membrane lipoprotein carrier protein lola | APR48_28835 | Not Available | Negative | 6192101 - 6192739 | 22780.1 |
| cell division protein ftsk | APR48_28840 | Not Available | Negative | 6192895 - 6195330 | 88293.2 |
| hypothetical protein | APR48_28845 | Not Available | Negative | 6195467 - 6196141 | 24982.6 |
| thioredoxin reductase | APR48_28850 | Not Available | Positive | 6196330 - 6197289 | 34388.0 |
| 50s ribosomal protein l28 | APR48_28855 | Not Available | Positive | 6197525 - 6197758 | 8793.68 |
| 50s ribosomal protein l33 | APR48_28860 | Not Available | Positive | 6197770 - 6197943 | 6547.1 |
| aminotransferase | APR48_28865 | Not Available | Negative | 6198086 - 6199300 | 46068.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
