Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR48_28770 | Not Available | Positive | 6179483 - 6180508 | 37203.6 |
| taurine abc transporter permease | APR48_28775 | Not Available | Negative | 6180426 - 6181307 | 32247.5 |
| nitrate abc transporter atp-binding protein | APR48_28780 | Not Available | Negative | 6181300 - 6182088 | 28639.7 |
| taurine abc transporter substrate-binding protein | APR48_28785 | Not Available | Negative | 6182115 - 6183131 | 36164.5 |
| hypothetical protein | APR48_28790 | Not Available | Positive | 6183299 - 6183490 | 7649.17 |
| nad-dependent dehydratase | APR48_28795 | Not Available | Negative | 6183613 - 6184545 | 34516.6 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | APR48_28800 | Not Available | Positive | 6184609 - 6185673 | 38807.5 |
| abc transporter substrate-binding protein | APR48_28805 | Not Available | Positive | 6185798 - 6186730 | 32266.9 |
| abc transporter atp-binding protein | APR48_28810 | Not Available | Negative | 6186815 - 6187591 | 27261.5 |
| abc transporter atp-binding protein | APR48_28815 | Not Available | Negative | 6187593 - 6188369 | 28196.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
