Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20 | APR48_28720 | Not Available | Positive | 6169749 - 6171080 | 46539.5 |
| hypothetical protein | APR48_28725 | Not Available | Negative | 6171103 - 6172077 | 34694.7 |
| hypothetical protein | APR48_28730 | Not Available | Negative | 6172193 - 6172834 | 23199.4 |
| thiamine pyrophosphate-binding protein | APR48_28735 | Not Available | Positive | 6172976 - 6173506 | 19365.6 |
| hypothetical protein | APR48_28740 | Not Available | Positive | 6173512 - 6174147 | 22467.0 |
| glucose-methanol-choline oxidoreductase | APR48_28745 | Not Available | Positive | 6174144 - 6175775 | 58857.3 |
| abc transporter substrate-binding protein | APR48_28750 | Not Available | Positive | 6175803 - 6176780 | 33562.1 |
| hypothetical protein | APR48_28755 | Not Available | Negative | 6176781 - 6177443 | 24056.8 |
| hypothetical protein | APR48_28760 | Not Available | Negative | 6177440 - 6178246 | 29348.1 |
| cyclopropane-fatty-acyl-phospholipid synthase | APR48_28765 | Not Available | Negative | 6178257 - 6179300 | 40469.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
