Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | APR48_28670 | Not Available | Negative | 6159265 - 6160077 | 28506.8 |
| choline dehydrogenase | APR48_28675 | Not Available | Positive | 6160173 - 6161822 | 59426.7 |
| mfs transporter | APR48_28680 | Not Available | Positive | 6161899 - 6163218 | 47577.4 |
| hypothetical protein | APR48_28685 | Not Available | Negative | 6163234 - 6163914 | 24104.3 |
| hypothetical protein | APR48_28690 | Not Available | Negative | 6163911 - 6164264 | 12590.9 |
| hypothetical protein | APR48_28695 | Not Available | Positive | 6164476 - 6165408 | 33716.0 |
| abc transporter substrate-binding protein | APR48_28700 | Not Available | Negative | 6165387 - 6166289 | 31896.6 |
| 2,2-dialkylglycine decarboxylase | APR48_28705 | Not Available | Negative | 6166306 - 6167640 | 48262.2 |
| lysr family transcriptional regulator | APR48_28710 | Not Available | Positive | 6167816 - 6168715 | 32628.8 |
| lysr family transcriptional regulator | APR48_28715 | Not Available | Negative | 6168723 - 6169604 | 31660.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
