Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoacetaldehyde dehydrogenase | APR48_28620 | Not Available | Positive | 6149100 - 6150548 | 50873.5 |
| long-chain fatty acid--coa ligase | APR48_28625 | Not Available | Positive | 6150551 - 6152068 | 53633.6 |
| hypothetical protein | APR48_28630 | Not Available | Positive | 6152065 - 6152859 | 27402.8 |
| hypothetical protein | APR48_28635 | Not Available | Negative | 6152822 - 6154060 | 45373.4 |
| acyl-coa dehydrogenase | APR48_28640 | Not Available | Negative | 6154143 - 6155390 | 44085.3 |
| hypothetical protein | APR48_28645 | Not Available | Positive | 6155563 - 6156558 | 36094.2 |
| 3-demethylubiquinone-9 3-methyltransferase | APR48_28650 | Not Available | Negative | 6156545 - 6156934 | 14307.2 |
| nadph-dependent fmn reductase | APR48_28655 | Not Available | Negative | 6156956 - 6157546 | 21696.8 |
| hypothetical protein | APR48_28660 | Not Available | Positive | 6157659 - 6158672 | 35673.6 |
| hypothetical protein | APR48_28665 | Not Available | Negative | 6158683 - 6159141 | 15872.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
